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Microplastics in the food chain: impact on the microbial and planktonic organisms

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  • This record describes the Underway (UWY) data collected from the Marine National Facility (MNF) RV Investigator Voyage IN2021_T01, titled "Transit Brisbane-Darwin." The voyage took place between June 12 and June 23, 2021 departing from Brisbane (QLD) and arriving in Darwin (NT). Standard Underway data is continuously recorded, consisting of: (1) Navigation data (NAV): Latitude, Longitude, Speed, Heading, Course Over Ground, Gyros, and Doppler Log (dual GPS instrument). (2) Thermosalinograph (TSG): Water Salinity, Flow-Rate, Temperature, Fluorescence, pCO2 and Optode/Oxygen. (3) Atmospheric (MET): Humidity, Wind Speed and Direction (vane and ultrasonic), Radiometer/Sea Surface Temperature, Pyranometer/Solar Radiation, Photosynthetically Active Radiation (PAR), Air Temperature, Air Pressure, Rain, Ozone and Trace Gases (port and starboard instruments). The quality-controlled RV Investigator underway meteorological and SST data are supplied to the IMOS AODN where they are publicly available at the "Ships of Opportunity" Thredds server (http://thredds.aodn.org.au/thredds/catalog/IMOS/SOOP/SOOP-ASF/VLMJ_Investigator/catalog.html) for research. From there, they are downloaded by NOAA for their In Situ Quality Monitoring web site (iQUAM2) and made available for satellite SST validation. The SBE 38 SST data are used within the Australian Bureau of Meteorology for real-time satellite SST validation and ingested into real-time SST analyses which are then used as the boundary condition for Numerical Weather Prediction models. The meteorological and SST data are uploaded onto the Global Telecommunications System (GTS) for global dissemination to Meteorological Agencies, and separately supplied to the SAMOS (http://samos.coaps.fsu.edu/html/) Project for air-sea flux research. The real-time SBE 38 SST data are currently (2017) used in the following data products (accessed via the GTS): • International Comprehensive Ocean-Atmosphere Data Set (ICOADS R3.0) (http://icoads.noaa.gov/) • NOAA NCEI Extended Reconstructed Sea Surface Temperature version 4 (ERSST.v4) (https://www.ncdc.noaa.gov/data-access/marineocean-data/extended-reconstructed-sea-surface-temperature-ersst-v4) • Hadley Centre SST Data Set (HadSST3) (http://www.metoffice.gov.uk/hadobs/hadsst3/) • Global Ocean Surface Underway Data (GOSUD) Project (http://www.gosud.org/) • Bureau of Meteorology daily and weekly SST analyses (http://www.bom.gov.au/marine/sst.shtml) • NOAA NCEI “Reynolds” daily global OISST analysis (https://www.ncdc.noaa.gov/oisst) • NASA JPL “MUR” 1 km daily global SST analysis (https://mur.jpl.nasa.gov/) • UK Met Office “OSTIA” daily global SST analysis (http://ghrsst-pp.metoffice.com/pages/latest_analysis/ostia.html) • CMC daily global SST analysis • Ourocean “G1SST” global daily 1 km SST analysis (https://ourocean.jpl.nasa.gov/SST) As part of the underway data gathering system, other datasets are produced (e.g., pCO2, ISAR SST) which are processed separately and have their own metadata records. Data are recorded at 5 second intervals. Near real-time data are available via the link "Visualisation tool for Underway Data." This dataset has been processed and archived within the CSIRO National Collections and Marine Infrastructure (NCMI) Information and Data Centre (IDC) in Hobart (TAS). Data are available at time intervals of 5 sec (NetCDF format), 10 sec and 5 min (ASCII format). Additional information regarding this dataset is contained in the Voyage Summary and/or the Data Processing Report for this voyage.

  • This record describes the End of Voyage (EOV) data archive from the Marine National Facility (MNF) RV Investigator voyage IN2024_T01, titled "Fremantle to Hobart, 2024 Transit." The voyage took place between March 9, 2024 and March 20, 2024 (AEST), departing from Fremantle and returning to Hobart. For further information please refer to the voyage documentation links. Instruments used and data collected include: Regular measurements: Acoustic Doppler Current Profiler (ADCP; 75, 150 KHz ), Greenhouse Gas Analysers (Picarro), Cloud Condensation Nuclei counter (CCN), Condensation Particle Counters (CPC), Disdrometer, Radon sensor, Black Carbon sensor (Aethalometer), Scanning Mobility Particle Sizers (SMPS), CTD, Hydrochemistry, Fisheries Echosounder (EK80), Multibeam Echosounder (EM710, EM122), Sub-bottom Profiler (SBP120), GPS Positioning System, Doppler Velocity Log, Thermosalinographs (TSG), Fluorometer, Oxygen Optode, Infrared Sea Surface Temperature Autonomous Radiometer (ISAR), pCO2, Multiangle Absorption Photometer (MAAP), Ozone Sensor, Nephelometer, Atmospheric Temperature, Humidity, Pressure, Wind and Rain sensors, Photosynthetically Active Radiation (PAR) sensor, Precision Infrared Radiometer (PIR), Precision Spectral Pyranometer (PSP), Starboard and Portside Radiometers, Air Sampler, Ultra Short BaseLine Underwater Positioning System (USBL), Weather Radar, Expendable Bathythermographs (XBTs), Rock Dredge, Environmental DNA (eDNA), Microplastics, GAW Atmospheric Measurements (Thermo Scientific Model 49i Ozone monitor, PICARRO G2301 Spectrometer, nano Scanning Mobility Particle Sizer (Grimm), Aerodyne Mini-QCL Greenhouse gas spectrometers, Thermo Scientific Model 5012 MultiAngle Atmospheric Photometer, Condensation Particle Counter (TSI 3772), Cloud Condensation Nuclei Counter, Atmospheric nephelometer). Voyage-specific measurements: Magnetometer, Multiple Plankton Sampler (HydroBIOS Multinet; Mammoth), Micro Rain Radar (MRR), Proton-Transfer-Reaction Mass Spectrometry (PTR-MS), Mercury Analyser (Tekran), Aerosol Chemical Speciation Monitor (ACSM), Core Argo floats, Sound Velocity Profile (SVP). The archive for the IN2024_T01 EOV raw data is curated by the CSIRO National Collections and Marine Infrastructure (NCMI) Information and Data Centre (IDC) in Hobart, with a permanent archive at the CSIRO Data Access Portal (https://data.csiro.au/), providing access to voyage participants and processors of the data collected on the voyage. All voyage documentation is available electronically to MNF support via the local network. Applications to access voyage documentation by non-CSIRO participants can be made via data-requests-hf@csiro.au. All processed data from this voyage are made publicly available through the MNF Data Trawler (in the related links).

  • This record describes the End of Voyage (EOV) data archive from the Marine National Facility (MNF) RV Investigator voyage IN2021_T01, titled "Transit: Brisbane to Darwin". The voyage took place from Brisbane (QLD) to Darwin (NT) between June 10th (AEST) and June 23rd (ACST), 2021. There were seven projects on this voyage: • Microplastics in the food chain: impact on the microbial and planktonic organisms; • Linking the Biological Carbon Pump flux to microbial colonisation of sinking particles in the Southern Ocean in the Coral Sea; • Dinoflagellates & broader planktonic assemblage observation; • BGC-Argo Float Deployment; • Cosmic Ray Measurements; • Carbon Sampling; and • Flow cytometric classification of the phytoplankton community across Australia’s top end For further information please refer to the voyage documentation links. Instruments used and data collected include: Regular measurements: Lowered ADCP (LADCP), Acoustic Doppler Current Profiler (ADCP; 75, 150 KHz ), Greenhouse Gas Analysers (Picarro), Cloud Condensation Nuclei counter (CCN), Condensation Particle Counters (CPC), Disdrometer, Radon Sensor, Scanning Mobility Particle Sizers (SMPS), CTD, Hydrochemistry, Fisheries Echosounder (EK60, EK80), Multibeam Echosounder (EM710, EM122), Sub-bottom Profiler (SBP120), GPS Positioning System, Thermosalinographs (TSG), Fluorometer, Oxygen optode, Infrared Sea Surface Temperature Autonomous Radiometer (ISAR), pCO2, Gravimeter, Multiangle Absorption Photometer (MAAP), Ozone Sensor, Nephelometer, Atmospheric Temperature, Humidity, Pressure, Wind and Rain sensors, Photosynthetically Active Radiation (PAR) sensor, Precision Infrared Radiometer (PIR), Precision Spectral Pyranometer (PSP), Starboard and Portside Radiometers, Air Sampler,Weather Radar. Voyage-specific measurements: Cosmic Ray Detector, Underwater Bioluminescence Assessment Tool (UBAT), Multiple Plankton Sampler (HydroBIOS Multinet). The archive for the IN2021_T01 EOV raw data is curated by the CSIRO National Collections and Marine Infrastructure (NCMI) Information and Data Centre (IDC) in Hobart, with a permanent archive at the CSIRO Data Access Portal (DAP, https://data.csiro.au/dap/), providing access to voyage participants and processors of the data collected on the voyage. All voyage documentation is available electronically to MNF support via the local network. Access to voyage documentation for non-CSIRO participants can be made via NCMI_DataLibrarians@csiro.au.

  • This record describes the End of Voyage (EOV) data archive from the Marine National Facility (MNF) RV Investigator voyage IN2024_V02, titled "SOTS: Southern Ocean Time Series automated moorings for climate and carbon cycle studies southwest of Tasmania." The voyage took place between March 31, 2024 and April 19, 2024 (AEST), departing from Hobart and returning to Hobart. For further information please refer to the voyage documentation links. Instruments used and data collected include: Regular measurements: Acoustic Doppler Current Profiler (ADCP; 75, 150 KHz ), Greenhouse Gas Analysers (Picarro), Cloud Condensation Nuclei counter (CCN), Condensation Particle Counters (CPC), Disdrometer, Radon sensor, Scanning Mobility Particle Sizers (SMPS), CTD, Hydrochemistry, Fisheries Echosounder (EK80), Multibeam Echosounder (EM710, EM122), Sub-bottom Profiler (SBP120), GPS Positioning System, Doppler Velocity Log, Thermosalinographs (TSG), Fluorometer, Oxygen Optode, pCO2, Multiangle Absorption Photometer (MAAP), Sun photometer (Microtops), Ozone Sensor, Nephelometer, Atmospheric Temperature, Humidity, Pressure, Wind and Rain sensors, Photosynthetically Active Radiation (PAR) sensor, Precision Infrared Radiometer (PIR), Precision Spectral Pyranometer (PSP), Starboard and Portside Radiometers, Air Sampler, Ultra Short BaseLine Underwater Positioning System (USBL), GAW Atmospheric Measurements (Thermo Scientific Model 49i Ozone monitor, PICARRO G2301 Spectrometer, nano Scanning Mobility Particle Sizer (Grimm), Aerodyne Mini-QCL Greenhouse gas spectrometers, Thermo Scientific Model 5012 MultiAngle Atmospheric Photometer, Condensation Particle Counter (TSI 3772), Cloud Condensation Nuclei Counter, Atmospheric nephelometer), Expendable Bathythermographs (XBTs). Voyage-specific measurements: Aerosol samples, Deep Towed Camera (DTC), Micro Rain Radar (MRR), Microplastics, Moorings, Multiple Plankton Sampler (HydroBIOS Multinet). The archive for the IN2024_V02 EOV raw data is curated by the CSIRO National Collections and Marine Infrastructure (NCMI) Information and Data Centre (IDC) in Hobart, with a permanent archive at the CSIRO Data Access Portal (https://data.csiro.au/), providing access to voyage participants and processors of the data collected on the voyage. All voyage documentation is available electronically to MNF support via the local network. Applications to access voyage documentation by non-CSIRO participants can be made via data-requests-hf@csiro.au. All processed data from this voyage are made publicly available through the MNF Data Trawler (in the related links).